Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaAnng06950DBnaAnng06950D protein. (792 aa)    
Predicted Functional Partners:
BnaC05g23660D
Non-specific serine/threonine protein kinase.
    
 
 0.593
BnaC01g30860D
BnaC01g30860D protein.
    
 
 0.519
BnaC05g48960D
BnaC05g48960D protein; Belongs to the protein kinase superfamily.
    
 
 0.519
BnaA01g36500D
BnaA01g36500D protein.
    
 
 0.519
BnaCnng66350D
BnaCnng66350D protein.
    
 
 0.519
BnaC03g59770D
BnaC03g59770D protein.
    
 
 0.480
BnaC04g28780D
Non-specific serine/threonine protein kinase.
    
 
 0.480
BnaCnng17250D
Non-specific serine/threonine protein kinase.
    
 
 0.480
BnaA03g55230D
BnaA03g55230D protein.
   
  
 0.447
BnaA09g43760D
BnaA09g43760D protein.
    
 
 0.436
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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