STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaAnng06720DBnaAnng06720D protein. (75 aa)    
Predicted Functional Partners:
BnaA05g34050D
BnaA05g34050D protein.
   
 
 0.934
BnaC05g48650D
BnaC05g48650D protein.
   
 
 0.934
BnaA09g41520D
BnaA09g41520D protein.
   
 
 0.917
BnaC04g01510D
BnaC04g01510D protein; Belongs to the DEAD box helicase family.
  
  
 0.915
BnaA05g28310D
BnaA05g28310D protein.
   
 0.902
BnaA01g31610D
BnaA01g31610D protein.
   
 0.902
BnaAnng36350D
BnaAnng36350D protein.
   
 0.902
BnaC04g49130D
BnaC04g49130D protein.
   
  0.898
BnaC04g49140D
BnaC04g49140D protein.
   
  0.898
BnaC04g49170D
BnaC04g49170D protein.
   
  0.898
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.