STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC09g33780DBnaC09g33780D protein; Belongs to the AAA ATPase family. (404 aa)    
Predicted Functional Partners:
BnaC03g60090D
BnaC03g60090D protein.
   
 0.997
BnaA06g37370D
BnaA06g37370D protein.
   
 0.997
BnaC07g32150D
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.
  
 0.997
BnaC09g37640D
BnaC09g37640D protein; Belongs to the AAA ATPase family.
  
0.997
BnaC02g09300D
BnaC02g09300D protein.
  
0.997
BnaA02g04630D
BnaA02g04630D protein.
  
0.997
BnaC03g34300D
BnaC03g34300D protein; Belongs to the AAA ATPase family.
  
0.996
BnaAnng02660D
BnaAnng02470D protein; Belongs to the AAA ATPase family.
  
0.996
BnaA05g31700D
BnaA05g31700D protein; Belongs to the AAA ATPase family.
  
0.996
BnaC03g26680D
BnaC03g26680D protein.
   
 0.996
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (14%) [HD]