STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA02g14240DBnaA02g14240D protein. (107 aa)    
Predicted Functional Partners:
BnaA09g44010D
BnaA09g44010D protein.
      
 0.518
BnaA04g15680D
BnaA04g15680D protein.
  
     0.508
BnaA02g35940D
BnaA02g35940D protein.
  
     0.490
BnaA06g24390D
BnaA06g24390D protein.
  
   
 0.485
BnaC04g01000D
BnaC04g01000D protein.
      
 0.477
BnaC09g47440D
BnaC09g47440D protein.
  
   
 0.475
BnaA03g13220D
BnaA03g13220D protein.
  
     0.475
BnaC02g25750D
BnaC02g25750D protein.
      
 0.465
BnaA02g36200D
BnaA02g36200D protein.
      
 0.465
BnaCnng26920D
BnaCnng26920D protein.
  
     0.463
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.