STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA03g11700DBnaA03g11700D protein. (435 aa)    
Predicted Functional Partners:
BnaA06g39150D
BnaA06g39150D protein.
  
     0.446
BnaAnng27750D
BnaAnng27750D protein.
  
     0.438
BnaAnng26990D
BnaAnng26990D protein.
  
     0.436
BnaA08g06830D
BnaA06g16390D protein.
  
     0.434
BnaA06g18990D
BnaA06g18990D protein.
  
     0.433
BnaCnng53210D
BnaCnng53210D protein.
  
     0.430
BnaC02g46630D
BnaC02g46630D protein.
  
     0.425
BnaC01g41610D
BnaC01g41610D protein.
  
     0.424
BnaA02g33200D
BnaA02g33200D protein.
  
     0.423
BnaA01g35190D
BnaA01g35190D protein.
  
     0.422
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.