STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA08g15490DBnaA08g15490D protein. (321 aa)    
Predicted Functional Partners:
BnaA09g10370D
BnaA09g10370D protein.
  
   
 0.559
BnaC08g47710D
BnaC08g47710D protein.
      
 0.491
BnaC07g32760D
BnaC07g32760D protein.
      
 0.470
BnaA07g00600D
BnaA07g00600D protein.
      
 0.470
BnaCnng21880D
BnaCnng21880D protein.
      
 0.461
BnaC01g20720D
BnaC01g20720D protein.
      
 0.457
BnaA03g49100D
BnaA03g49100D protein.
      
 0.457
BnaC07g50630D
BnaC07g50630D protein.
      
 0.457
BnaC08g46470D
BnaC08g46470D protein.
  
     0.411
BnaA08g28810D
BnaA08g28810D protein.
  
     0.402
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.