STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA08g15650DBnaA08g15650D protein; Belongs to the cytochrome P450 family. (496 aa)    
Predicted Functional Partners:
BnaCnng43220D
BnaCnng43220D protein.
      
 0.493
BnaCnng65380D
BnaCnng65380D protein.
      
 0.493
BnaC08g41540D
Flavin-containing monooxygenase.
   
 
 0.472
BnaA08g24880D
Flavin-containing monooxygenase.
   
 
 0.472
BnaA09g47360D
Flavin-containing monooxygenase.
   
 
 0.472
BnaC08g15390D
Flavin-containing monooxygenase.
   
 
 0.472
BnaCnng15860D
BnaCnng15860D protein.
  
  
  0.472
BnaA09g06580D
BnaA09g06580D protein.
  
  
  0.471
BnaC02g22640D
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.467
BnaAnng27200D
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.467
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.