STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC02g41410DBnaC02g41410D protein. (167 aa)    
Predicted Functional Partners:
BnaC07g49760D
BnaC07g49760D protein.
     
 0.731
BnaC02g20630D
BnaC02g20630D protein.
     
 0.695
BnaA09g53440D
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
 0.666
BnaCnng41930D
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
 0.666
BnaC06g40760D
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
 0.666
BnaA09g55270D
BnaA09g55270D protein.
     
 0.633
BnaA05g16960D
BnaA05g16960D protein.
     
 0.615
BnaC05g29760D
BnaC05g29760D protein.
     
 0.615
BnaA06g33260D
BnaA06g33260D protein.
     
 0.615
BnaAnng12610D
BnaAnng12610D protein.
     
 0.615
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.