STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaCnng11970DBnaCnng11970D protein. (1730 aa)    
Predicted Functional Partners:
BnaA01g17490D
BnaA01g17490D protein; Belongs to the DOCK family.
  
   
 0.673
BnaC01g21820D
BnaC01g21820D protein; Belongs to the DOCK family.
  
   
 0.672
BnaC09g42860D
BnaC09g42860D protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.614
BnaC09g38080D
BnaC09g38080D protein.
  
 
0.578
BnaA07g03440D
BnaA07g03440D protein.
    
 0.568
BnaC03g77480D
BnaC03g77480D protein.
    
   0.553
BAT2
1-acyl-sn-glycerol-3-phosphate acyltransferase BAT2, chloroplastic; Plastidial enzyme of the prokaryotic glycerol-3-phosphate pathway that converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating an acyl moiety at position sn-2. Utilizes palmitoyl-ACP (16:0-ACP) to produce phosphatidic acid containing a saturated group at position sn-2, which is characteristic of lipids synthesized by the prokaryotic pathway. In vitro, can use 16:0-CoA as acyl donor.
    
   0.553
BnaAnng25150D
BnaAnng25150D protein.
  
 
 0.541
BnaC04g31600D
BnaC04g31600D protein.
   
 
0.537
BnaC05g10230D
BnaC05g10230D protein.
   
 
0.537
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.