STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA09g41910DReticulon-like protein. (208 aa)    
Predicted Functional Partners:
BnaC03g64470D
BnaC03g64470D protein.
   
  
 0.615
BnaA09g27640D
BnaA09g27640D protein.
   
  
 0.592
BnaCnng16280D
BnaCnng16280D protein.
   
  
 0.592
BnaCnng16300D
BnaCnng16300D protein.
   
  
 0.592
BnaC03g72700D
BnaC03g72700D protein.
   
  
 0.592
BnaCnng33730D
BnaCnng33730D protein.
   
  
 0.552
BnaA02g13690D
Reticulon-like protein.
      
0.545
BnaC01g37380D
BnaC01g37380D protein.
    
 
 0.532
BnaCnng28560D
Protein ROOT HAIR DEFECTIVE 3 homolog; Probable GTP-binding protein that may be involved in cell development; Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3-type GTPase family. RHD3 subfamily.
    
 
 0.532
BnaA09g17070D
BnaA09g17070D protein.
   
  
 0.525
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.