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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC03g66100DBnaC03g66100D protein. (664 aa)    
Predicted Functional Partners:
BnaA07g04890D
BnaA07g04890D protein.
  
   
 0.598
BnaC05g12080D
BnaC05g12080D protein.
    
 0.497
BnaA06g10530D
BnaA06g10530D protein.
    
 0.497
BnaA09g56560D
BnaA09g56560D protein.
    
 0.497
BnaC03g70040D
BnaC03g70040D protein.
      
 0.485
BnaA06g00570D
BnaA06g00570D protein.
      
 0.485
BnaC06g07030D
BnaC06g07030D protein.
      
 0.485
BnaCnng28470D
BnaCnng28470D protein.
      
 0.485
BnaC05g01720D
BnaC05g01720D protein.
    
 0.484
BnaC05g01710D
BnaC05g01710D protein.
    
 0.484
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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