STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA02g27490DBnaA02g27490D protein. (207 aa)    
Predicted Functional Partners:
BnaCnng04870D
BnaCnng04870D protein.
  
 
  0.562
BnaC02g42130D
BnaC02g42130D protein.
  
 
  0.561
BnaC04g32300D
BnaC04g32300D protein.
  
 
  0.554
BnaC04g37550D
BnaC04g37550D protein.
  
 
  0.554
BnaC01g09940D
BnaC01g09940D protein.
  
 
  0.553
BnaAnng40700D
BnaAnng40700D protein.
  
 
  0.547
BnaA09g16330D
BnaA09g16330D protein.
  
 
   0.544
BnaCnng34400D
BnaCnng34400D protein.
  
 
  0.542
BnaCnng44290D
BnaCnng44290D protein.
  
 
  0.542
BnaC08g44020D
BnaC08g44020D protein.
  
 
  0.536
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.