STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC04g24770DBnaC04g24770D protein. (136 aa)    
Predicted Functional Partners:
BnaC02g22900D
BnaC02g22900D protein.
  
 
 0.850
BnaCnng49000D
BnaCnng49000D protein.
  
 
 0.850
BnaA10g12030D
BnaA10g12030D protein.
  
  
 0.715
BnaC09g33700D
BnaC09g33700D protein.
  
  
 0.715
BnaA01g19280D
BnaA01g19280D protein.
  
  
 0.690
BnaC01g23240D
BnaC01g23240D protein.
  
  
 0.689
BnaA01g14420D
BnaA01g14420D protein.
  
 
 0.666
BnaA03g47110D
BnaA03g47110D protein.
  
 
 0.663
BnaC08g44970D
BnaC08g44970D protein.
  
   
 0.633
BnaC08g48840D
BnaC08g48840D protein.
   
  
 0.624
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.