STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA02g32880DBnaA02g32880D protein. (155 aa)    
Predicted Functional Partners:
BnaC04g32090D
Ferredoxin-thioredoxin reductase, catalytic chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin.
   
 
 0.926
BnaA04g09900D
Ferredoxin-thioredoxin reductase, catalytic chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin.
   
 
 0.926
BnaCnng05900D
BnaCnng05900D protein.
   
   0.673
BnaC02g06570D
BnaC02g06570D protein.
   
   0.673
BnaA05g33390D
BnaA05g33390D protein.
   
   0.673
BnaAnng12670D
BnaAnng12670D protein.
   
   0.673
BnaA02g35040D
BnaA02g35040D protein.
   
   0.673
BnaC09g00770D
BnaC09g00770D protein.
   
   0.663
BnaA09g01610D
BnaA09g01610D protein.
   
   0.663
BnaCnng16050D
BnaCnng16050D protein.
   
   0.663
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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