Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BnaA02g32880D | BnaA02g35040D | A0A078ICI4 | A0A078JT23 | BnaA02g32880D protein. | BnaA02g35040D protein. | 0.673 |
BnaA02g32880D | BnaA04g09900D | A0A078ICI4 | A0A078I187 | BnaA02g32880D protein. | Ferredoxin-thioredoxin reductase, catalytic chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | 0.926 |
BnaA02g32880D | BnaA05g33390D | A0A078ICI4 | A0A078IQ98 | BnaA02g32880D protein. | BnaA05g33390D protein. | 0.673 |
BnaA02g32880D | BnaA09g01610D | A0A078ICI4 | A0A078ICG7 | BnaA02g32880D protein. | BnaA09g01610D protein. | 0.663 |
BnaA02g32880D | BnaAnng12670D | A0A078ICI4 | A0A078IWH9 | BnaA02g32880D protein. | BnaAnng12670D protein. | 0.673 |
BnaA02g32880D | BnaC02g06570D | A0A078ICI4 | A0A078HKG5 | BnaA02g32880D protein. | BnaC02g06570D protein. | 0.673 |
BnaA02g32880D | BnaC04g32090D | A0A078ICI4 | A0A078HGD8 | BnaA02g32880D protein. | Ferredoxin-thioredoxin reductase, catalytic chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | 0.926 |
BnaA02g32880D | BnaC09g00770D | A0A078ICI4 | A0A078G9A1 | BnaA02g32880D protein. | BnaC09g00770D protein. | 0.663 |
BnaA02g32880D | BnaCnng05900D | A0A078ICI4 | A0A078GU43 | BnaA02g32880D protein. | BnaCnng05900D protein. | 0.673 |
BnaA02g32880D | BnaCnng16050D | A0A078ICI4 | A0A078IFU0 | BnaA02g32880D protein. | BnaCnng16050D protein. | 0.663 |
BnaA02g35040D | BnaA02g32880D | A0A078JT23 | A0A078ICI4 | BnaA02g35040D protein. | BnaA02g32880D protein. | 0.673 |
BnaA02g35040D | BnaA04g09900D | A0A078JT23 | A0A078I187 | BnaA02g35040D protein. | Ferredoxin-thioredoxin reductase, catalytic chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | 0.879 |
BnaA02g35040D | BnaC04g32090D | A0A078JT23 | A0A078HGD8 | BnaA02g35040D protein. | Ferredoxin-thioredoxin reductase, catalytic chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | 0.879 |
BnaA04g09900D | BnaA02g32880D | A0A078I187 | A0A078ICI4 | Ferredoxin-thioredoxin reductase, catalytic chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | BnaA02g32880D protein. | 0.926 |
BnaA04g09900D | BnaA02g35040D | A0A078I187 | A0A078JT23 | Ferredoxin-thioredoxin reductase, catalytic chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | BnaA02g35040D protein. | 0.879 |
BnaA04g09900D | BnaA05g33390D | A0A078I187 | A0A078IQ98 | Ferredoxin-thioredoxin reductase, catalytic chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | BnaA05g33390D protein. | 0.702 |
BnaA04g09900D | BnaA09g01610D | A0A078I187 | A0A078ICG7 | Ferredoxin-thioredoxin reductase, catalytic chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | BnaA09g01610D protein. | 0.812 |
BnaA04g09900D | BnaAnng12670D | A0A078I187 | A0A078IWH9 | Ferredoxin-thioredoxin reductase, catalytic chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | BnaAnng12670D protein. | 0.702 |
BnaA04g09900D | BnaC02g06570D | A0A078I187 | A0A078HKG5 | Ferredoxin-thioredoxin reductase, catalytic chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | BnaC02g06570D protein. | 0.879 |
BnaA04g09900D | BnaC09g00770D | A0A078I187 | A0A078G9A1 | Ferredoxin-thioredoxin reductase, catalytic chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | BnaC09g00770D protein. | 0.812 |
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