Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaA01g22720DBnaA01g22720D protein; Belongs to the protein kinase superfamily. (417 aa)    
Predicted Functional Partners:
BnaCnng65160D
BnaCnng65160D protein.
  
  0.425
BnaA08g31670D
BnaA08g31670D protein; Belongs to the protein kinase superfamily.
  
  0.424
BnaA08g02570D
BnaA08g02570D protein.
  
  0.423
BnaC03g40790D
BnaC03g40790D protein.
  
  0.415
BnaCnng48080D
BnaCnng48080D protein.
  
  0.415
BnaA01g26270D
BnaA01g26270D protein.
  
  0.409
BnaA07g00650D
BnaA07g00650D protein.
    
  0.409
BnaCnng45690D
BnaCnng45690D protein.
  
  0.405
BnaAnng11710D
BnaAnng11710D protein.
  
  0.404
BnaA07g24180D
BnaA07g24180D protein.
      
 0.400
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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