STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaAnng09490D7,8-dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. (153 aa)    
Predicted Functional Partners:
BnaA01g06970D
BnaA01g06970D protein.
  
 
 0.999
BnaA05g30330D
BnaA05g30330D protein.
 
 
 0.975
BnaC05g44740D
BnaC05g44740D protein.
 
 
 0.975
BnaC05g44750D
BnaC05g44750D protein.
 
 
 0.975
BnaA01g32400D
BnaA01g32400D protein.
  
 
 0.969
BnaA02g30310D
BnaA02g30310D protein.
  
 
 0.969
BnaA05g27330D
7,8-dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
  
  
 
0.901
BnaA05g27340D
7,8-dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
  
  
 
0.901
BnaA09g53350D
BnaA09g53350D protein.
     
  0.900
BnaA09g43860D
BnaA09g43860D protein.
  
 
 0.841
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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