STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC04g29740DCytochrome b561 and DOMON domain-containing protein. (404 aa)    
Predicted Functional Partners:
BnaC05g43690D
BnaC05g43690D protein.
    
 0.881
BnaA05g37130D
BnaA05g37130D protein.
    
 0.881
BnaAnng24320D
BnaAnng24320D protein.
    
 0.881
BnaA05g28300D
BnaA05g28300D protein.
    
 0.861
BnaA01g31600D
BnaA01g31600D protein.
    
 0.861
BnaC09g50620D
BnaC09g50620D protein.
    
 0.861
BnaAnng26810D
BnaAnng26810D protein.
    
 0.861
BnaA09g17440D
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
 0.802
BnaC02g00390D
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
 0.802
BnaC03g77310D
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
 0.802
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.