STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA04g15500DBnaA04g15500D protein. (488 aa)    
Predicted Functional Partners:
BnaA03g51820D
BnaA03g51820D protein.
      
 0.515
BnaC05g08680D
BnaC05g08680D protein.
      
 0.493
BnaC05g08670D
BnaC05g08670D protein.
      
0.493
BnaA07g08840D
BnaA07g08840D protein.
      
 0.471
BnaA09g27960D
BnaA09g27960D protein.
      
 0.471
BnaA05g19600D
BnaA05g19600D protein.
      
 0.471
BnaC05g30720D
BnaC05g30720D protein.
      
 0.471
BnaC09g37350D
BnaC09g37350D protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
      
 0.470
BnaC04g43970D
BnaC04g43970D protein.
      
 0.467
BnaC04g43980D
BnaC04g43980D protein.
      
 0.467
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.