STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA07g24010DBnaA07g24010D protein. (236 aa)    
Predicted Functional Partners:
BnaA08g08050D
BnaA08g08050D protein.
      
 0.471
BnaAnng26140D
BnaAnng26140D protein.
      
 0.471
BnaA10g12360D
BnaA10g12360D protein.
      
 0.467
BnaA02g07100D
BnaA02g07100D protein.
      
 0.467
BnaC04g12270D
BnaC04g12270D protein.
      
 0.457
BnaA05g20110D
BnaA05g20110D protein.
      
 0.457
BnaA09g04710D
BnaA09g04710D protein.
   
 
 0.457
BnaA06g20840D
BnaA06g20840D protein.
      
 0.457
BnaC01g32440D
BnaC01g32440D protein.
      
 0.457
BnaC01g35260D
BnaC01g35260D protein.
   
 
 0.457
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.