STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaCnng16990DBnaCnng16990D protein. (152 aa)    
Predicted Functional Partners:
BnaC04g44540D
BnaC04g44540D protein.
  
 
  0.549
BnaA09g16330D
BnaA09g16330D protein.
  
 
  0.542
BnaCnng04870D
BnaCnng04870D protein.
  
 
   0.535
BnaC04g32300D
BnaC04g32300D protein.
  
     0.528
BnaA08g02100D
BnaA08g02100D protein.
  
 
  0.526
BnaC02g42130D
BnaC02g42130D protein.
  
     0.526
BnaC07g21060D
BnaC07g21060D protein.
  
 
   0.521
BnaA09g16320D
BnaA09g16320D protein.
  
     0.519
BnaCnng50580D
BnaCnng50580D protein.
  
 
  0.519
BnaA06g36930D
BnaA06g36930D protein.
  
 
   0.516
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.