STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA09g22840DBnaA09g22840D protein. (1236 aa)    
Predicted Functional Partners:
BnaA09g16760D
BnaA09g16760D protein.
    
 0.813
BnaC09g17650D
BnaC09g17650D protein.
    
 0.813
BnaA10g30300D
BnaA10g30300D protein.
     
 0.768
BnaAnng39620D
BnaAnng39620D protein.
     
 0.768
BnaC01g27250D
BnaC01g27250D protein.
     
 0.767
BnaA01g35740D
BnaA01g35740D protein.
     
 0.767
BnaC01g27570D
BnaC01g27570D protein.
  
     0.522
BnaA09g15030D
BnaA09g15030D protein.
  
     0.522
BnaAnng12040D
BnaAnng12040D protein.
  
     0.522
BnaC09g15650D
BnaC09g15650D protein.
  
     0.521
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.