STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA09g26820DBnaA09g26820D protein. (756 aa)    
Predicted Functional Partners:
BnaA09g26370D
BnaA09g26370D protein.
  
   
 0.608
BnaAnng30100D
BnaAnng30100D protein.
  
 
  0.567
BnaC05g40020D
BnaC05g40020D protein.
  
 
 0.565
BnaA02g24340D
BnaA02g24340D protein.
  
   
 0.563
BnaUnng02740D
BnaUnng02740D protein.
  
 
  0.560
BnaC04g21970D
BnaC04g21970D protein.
  
 
 0.558
BnaA03g48710D
BnaA03g48710D protein.
  
 
  0.557
BnaC03g13750D
BnaC03g13750D protein.
  
 
  0.556
BnaA06g22900D
BnaA06g22900D protein.
  
 
  0.554
BnaC04g04520D
BnaC04g04520D protein.
  
 
  0.553
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.