STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC06g12410DBnaC06g12410D protein; Belongs to the eIF-2B alpha/beta/delta subunits family. (513 aa)    
Predicted Functional Partners:
BnaC09g38210D
BnaC09g38210D protein.
  
 0.985
BnaC02g08730D
BnaC02g08730D protein.
  
 0.984
BnaA02g04240D
BnaA02g04240D protein.
  
 0.984
BnaA05g08930D
BnaA05g08930D protein.
   
 0.981
BnaA05g08940D
BnaA05g08940D protein.
   
 0.981
BnaA05g30300D
BnaA05g30300D protein; Belongs to the eIF-2B alpha/beta/delta subunits family.
  
0.979
BnaC05g44670D
BnaC05g44670D protein; Belongs to the eIF-2B alpha/beta/delta subunits family.
  
0.979
BnaA01g32370D
BnaA01g32370D protein; Belongs to the eIF-2B alpha/beta/delta subunits family.
  
0.979
BnaA06g00640D
BnaA06g00640D protein; Belongs to the eIF-2B alpha/beta/delta subunits family.
  
0.978
BnaC06g06670D
BnaC06g06670D protein; Belongs to the eIF-2B alpha/beta/delta subunits family.
  
0.978
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.