STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaAnng09670DBnaAnng09670D protein. (202 aa)    
Predicted Functional Partners:
BnaA07g03400D
BnaA07g03400D protein.
   
 0.983
BnaA01g21530D
BnaA01g21530D protein.
   
 0.967
BnaC01g27460D
BnaC01g27460D protein.
   
 0.967
BnaA08g27340D
BnaA08g27340D protein.
  
 0.952
BnaA09g50970D
BnaA09g50970D protein.
  
 0.951
BnaC08g45770D
BnaC08g45770D protein.
  
 0.951
BnaA07g03860D
BnaA07g03860D protein.
   
 0.949
BnaA06g36240D
Nuclear cap-binding protein subunit 2.
   
 0.947
BnaC04g03420D
BnaC04g03420D protein.
   
 0.943
BnaC03g64040D
BnaC03g64040D protein.
   
 
 0.927
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.