STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA10g28170DBnaA10g28170D protein. (140 aa)    
Predicted Functional Partners:
BnaA06g32760D
BnaA06g32760D protein.
  
     0.535
BnaC05g19910D
BnaC05g19910D protein.
  
     0.534
BnaA02g19890D
BnaA02g19890D protein.
  
   
 0.534
BnaC02g36230D
BnaC02g36230D protein.
  
     0.533
BnaA02g28980D
BnaA02g28980D protein.
  
     0.532
BnaA06g31930D
BnaA06g31930D protein.
  
     0.531
BnaA09g02100D
BnaA09g02100D protein.
  
     0.531
BnaA02g28140D
BnaA02g28140D protein.
  
     0.531
BnaC05g12610D
BnaC05g12610D protein.
  
     0.529
BnaC09g15330D
BnaC09g15330D protein.
  
     0.529
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.