STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaCnng17950DBnaCnng17950D protein. (354 aa)    
Predicted Functional Partners:
BnaC09g28910D
BnaC09g28910D protein.
  
     0.540
BnaA03g12500D
BnaA03g12500D protein.
  
     0.539
BnaC03g15380D
BnaC03g15380D protein.
  
     0.538
BnaA01g19480D
BnaA01g19480D protein.
  
     0.532
BnaC07g32230D
BnaC07g32230D protein.
  
     0.529
BnaA03g17240D
BnaA03g17240D protein.
  
     0.527
BnaC03g45150D
BnaC03g45150D protein.
  
     0.526
BnaC04g31420D
BnaC04g31420D protein.
  
     0.525
BnaC04g21810D
BnaC04g21810D protein.
  
     0.524
BnaC05g01780D
BnaC05g01780D protein.
  
     0.523
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.