STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA05g32910DBnaA05g32910D protein; Belongs to the protein kinase superfamily. (282 aa)    
Predicted Functional Partners:
BnaC05g51500D
BnaC05g51500D protein.
      
 0.577
BnaAnng06510D
BnaAnng06510D protein.
      
 0.577
BnaC01g36470D
BnaC01g36470D protein.
      
 0.536
BnaC04g02430D
BnaC04g02430D protein.
      
 0.520
BnaC04g48440D
BnaC04g48440D protein.
      
 0.519
BnaC02g25780D
BnaC02g25780D protein.
      
 0.506
BnaA07g24440D
BnaA07g24440D protein.
      
 0.492
BnaA09g28740D
BnaA09g28740D protein.
      
 0.492
BnaC06g02620D
BnaC06g02620D protein.
      
 0.492
BnaC02g33070D
BnaC02g33070D protein; Belongs to the protein kinase superfamily.
  
 
  0.484
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.