STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC03g74410DBnaC03g74410D protein. (65 aa)    
Predicted Functional Partners:
BnaA09g20120D
BnaA09g20120D protein.
  
  
 0.733
BnaC09g22450D
BnaC09g22450D protein.
  
  
 0.733
BnaUnng02690D
BnaUnng02690D protein.
  
  
 0.733
BnaC06g15260D
BnaC06g15260D protein.
  
  
 0.724
BnaC04g26270D
BnaC04g26270D protein.
  
  
 0.724
BnaA06g37480D
BnaA06g37480D protein.
  
  
 0.724
BnaA03g00930D
BnaA03g00930D protein.
  
  
 0.638
BnaA03g00370D
BnaA03g00370D protein.
  
  
 0.629
BnaA01g34480D
BnaA01g34480D protein.
  
  
 0.629
BnaCnng18410D
BnaCnng18410D protein.
  
  
 0.629
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.