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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC03g74370DBnaC03g74370D protein. (685 aa)    
Predicted Functional Partners:
BnaC03g64590D
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.581
BnaA01g06540D
BnaA01g06540D protein.
      
 0.575
BnaA02g19020D
BnaA02g19020D protein.
      
 0.575
BnaA03g50240D
BnaA03g50240D protein.
      
 0.575
BnaC03g78350D
BnaC03g78350D protein.
      
 0.575
BnaA01g06520D
BnaA01g06520D protein.
      
 0.574
BnaA09g05190D
Bidirectional sugar transporter SWEET; Mediates both low-affinity uptake and efflux of sugar across the membrane; Belongs to the SWEET sugar transporter family.
      
 0.570
BnaC07g03950D
Pectate lyase.
      
 0.570
BnaC05g48800D
BnaC05g48800D protein.
      
 0.570
BnaAnng24830D
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.541
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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