Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaA10g29440DBnaA10g29440D protein; Belongs to the protein kinase superfamily. (490 aa)    
Predicted Functional Partners:
BnaC06g10060D
BnaC06g10060D protein.
  
 
0.501
BnaA05g14660D
BnaA05g14660D protein.
  
 
0.500
BnaC04g22710D
BnaC04g22710D protein.
  
 
   0.487
BnaAnng05830D
BnaAnng05830D protein.
      
 0.439
BnaC03g69430D
BnaC03g69430D protein.
    
 0.425
BnaC06g43520D
BnaC06g43520D protein.
  
  
  0.421
BnaC05g49920D
BnaC05g49920D protein.
  
     0.419
BnaA07g24490D
BnaA07g24490D protein.
  
  
  0.418
BnaC03g29890D
BnaC03g29890D protein; Belongs to the protein kinase superfamily.
  
     0.417
BnaC06g30330D
BnaC06g30330D protein.
  
  
  0.417
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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