STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA10g06350DBnaA10g06350D protein. (155 aa)    
Predicted Functional Partners:
BnaA09g16190D
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.767
BnaC04g28650D
BnaC04g28650D protein.
  
 0.756
BnaC04g08780D
BnaC04g08780D protein.
  
 0.756
BnaA05g12480D
BnaA05g12480D protein.
  
 0.756
BnaC04g54450D
BnaC04g54450D protein.
  
 0.756
BnaAnng21140D
BnaAnng21140D protein.
  
 0.756
BnaA02g24100D
BnaA02g24100D protein; Belongs to the universal ribosomal protein uL5 family.
  
 
 0.750
BnaAnng05780D
BnaA03g58370D protein; Belongs to the universal ribosomal protein uL5 family.
  
 
 0.750
BnaA09g55240D
BnaA09g55240D protein.
  
 
 0.750
BnaC07g50200D
BnaC07g50200D protein; Belongs to the universal ribosomal protein uL5 family.
  
 
 0.750
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.