STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC09g28890DBnaC09g28890D protein. (169 aa)    
Predicted Functional Partners:
BnaAnng08530D
BnaAnng08530D protein.
   
 0.995
BnaC09g39050D
BnaC09g39050D protein.
   
 0.993
BnaC03g65880D
BnaC03g65880D protein; Belongs to the complex I LYR family.
   
 0.991
BnaA04g05280D
BnaA04g05280D protein.
   
 0.991
BnaA03g53000D
BnaA03g53000D protein; Belongs to the complex I LYR family.
   
 0.991
BnaA08g27970D
BnaA08g27970D protein.
   
 0.988
BnaCnng48520D
BnaCnng48520D protein.
   
 0.988
BnaUnng03160D
BnaUnng03160D protein.
   
 0.988
BnaAnng07980D
BnaAnng07980D protein.
   
 0.987
BnaCnng54350D
BnaCnng54350D protein.
   
 0.987
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.