STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA04g28600DBnaA04g28600D protein; Belongs to the GST superfamily. (224 aa)    
Predicted Functional Partners:
BnaA06g13760D
BnaA06g13760D protein; Belongs to the GST superfamily.
  
  
 0.778
BnaC05g15180D
BnaC05g15180D protein; Belongs to the GST superfamily.
  
  
 0.774
BnaCnng08030D
BnaCnng08030D protein; Belongs to the GST superfamily.
  
  
 0.768
BnaA02g35980D
BnaA02g35980D protein; Belongs to the GST superfamily.
  
  
 0.754
BnaC05g26630D
BnaC05g26630D protein.
   
 0.706
BnaAnng40060D
BnaAnng40060D protein.
   
 0.694
BnaA03g51760D
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 
 0.692
BnaC04g26180D
Glutathione reductase; Maintains high levels of reduced glutathione.
   
 
 0.691
BnaAnng31940D
Glutathione reductase; Maintains high levels of reduced glutathione.
   
 
 0.691
BnaA02g21680D
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 
 0.687
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.