STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC09g35930DBnaC09g35930D protein; Belongs to the leguminous lectin family. (222 aa)    
Predicted Functional Partners:
BnaA01g30420D
BnaA01g30420D protein.
  
 
  0.535
BnaA05g26530D
BnaA05g26530D protein.
  
 
  0.525
BnaC01g38580D
BnaC01g38580D protein.
  
 
  0.520
BnaC05g40570D
BnaC05g40570D protein.
  
 
  0.506
BnaCnng65370D
BnaCnng65370D protein.
  
 
  0.503
BnaC04g36400D
BnaC04g36400D protein.
  
 
  0.500
BnaA07g12400D
BnaA07g12400D protein.
  
 
  0.499
BnaCnng26390D
BnaCnng26390D protein.
  
 
  0.495
BnaA09g07770D
BnaA09g07770D protein.
  
     0.484
BnaA03g56160D
BnaA03g56160D protein.
  
 
   0.482
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.