STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA01g30520DBnaA01g30520D protein. (309 aa)    
Predicted Functional Partners:
BnaA02g19940D
BnaA02g19940D protein.
   
 0.990
BnaC02g23260D
BnaC02g23260D protein.
   
 0.990
BnaC06g43110D
BnaC06g43110D protein.
   
 0.990
BnaA07g38310D
BnaA07g38310D protein.
   
 0.990
BnaC03g74180D
BnaC03g74180D protein.
   
 0.989
BnaC04g05280D
BnaC04g05280D protein.
   
 0.981
BnaC04g05310D
BnaC04g05310D protein.
   
 0.981
BnaC04g56720D
BnaC04g56720D protein.
   
 0.981
BnaUnng01470D
BnaUnng01470D protein.
   
 0.981
BnaC03g74400D
DNA helicase; Belongs to the MCM family.
   
 0.969
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.