STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC02g45850DBnaC02g45850D protein. (265 aa)    
Predicted Functional Partners:
BnaA02g24730D
BnaA02g24730D protein.
  
 
  0.554
BnaA09g16330D
BnaA09g16330D protein.
  
 
  0.548
BnaC04g44540D
BnaC04g44540D protein.
  
 
  0.542
BnaA08g02100D
BnaA08g02100D protein.
  
 
  0.535
BnaC09g18270D
BnaC09g18270D protein.
  
     0.533
BnaCnng34400D
BnaCnng34400D protein.
  
     0.530
BnaC04g11620D
BnaC04g11620D protein.
  
     0.525
BnaCnng50580D
BnaCnng50580D protein.
  
 
  0.525
BnaC03g35320D
BnaC03g35320D protein.
  
     0.524
BnaC04g43490D
BnaC04g43490D protein.
  
     0.524
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.