STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaCnng19620DBnaCnng19620D protein. (411 aa)    
Predicted Functional Partners:
BnaA01g32570D
BnaA01g32570D protein.
  
     0.512
BnaC04g28860D
BnaC04g28860D protein.
  
     0.456
BnaC09g46760D
BnaC09g46760D protein.
  
     0.452
BnaC09g40310D
BnaC09g40310D protein.
  
     0.447
BnaC05g30530D
BnaC05g30530D protein.
  
     0.447
BnaA10g17090D
BnaA10g17090D protein.
  
     0.447
BnaC01g31100D
BnaC01g31100D protein.
  
     0.443
BnaA09g39810D
BnaA09g39810D protein.
  
     0.443
BnaA09g43880D
BnaA09g43880D protein.
  
     0.440
BnaA06g33340D
BnaA06g33340D protein; Belongs to the terpene synthase family.
  
     0.437
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.