STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA05g32750DBnaA05g32750D protein. (758 aa)    
Predicted Functional Partners:
BnaA09g45700D
BnaA09g45700D protein.
      
 0.508
BnaA09g35050D
BnaA09g35050D protein.
      
 0.499
BnaC08g40810D
BnaC08g40810D protein.
  
 
   0.485
BnaA09g46730D
BnaA09g46730D protein.
  
 
   0.485
BnaC02g01410D
BnaC02g01410D protein.
  
 
   0.479
BnaCnng64530D
BnaCnng64530D protein.
  
 
   0.473
BnaC08g11580D
BnaC08g11580D protein.
  
     0.467
BnaA01g24490D
BnaA01g24490D protein.
  
     0.465
BnaC04g44540D
BnaC04g44540D protein.
  
 
   0.445
BnaC06g09930D
BnaC06g09930D protein.
  
     0.445
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.