STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC03g74700DBnaC03g74700D protein. (184 aa)    
Predicted Functional Partners:
BnaA02g18610D
BnaA02g18610D protein.
  
  
 0.569
BnaCnng60930D
BnaCnng60930D protein.
  
  
 0.569
BnaC04g32950D
BnaC04g32950D protein; Belongs to the precorrin methyltransferase family.
  
  
 0.490
BnaA04g10650D
BnaA04g10650D protein; Belongs to the precorrin methyltransferase family.
  
  
 0.490
BnaCnng57780D
BnaCnng57780D protein.
  
  
 0.475
BnaA05g11030D
BnaA05g11030D protein.
     
 0.457
BnaCnng08640D
BnaCnng08640D protein.
     
 0.443
BnaCnng12780D
Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1.
      
 0.424
BnaA09g38710D
BnaA09g38710D protein.
     
 0.421
BnaC04g22020D
BnaC04g22020D protein.
     
 0.421
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.