BnaC02g45720D protein (Brassica napus) - STRING interaction network

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Score

BnaC02g45720D

BnaC02g45720D protein. (504 aa)

Predicted Functional Partners:

BnaC09g41060D

0.968

BnaA08g27430D

0.954

BnaC02g26240D

0.950

BnaC09g37610D

0.950

BnaA02g30460D

0.945

BnaC04g22660D

0.937

BnaA09g03870D

0.933

BnaC03g63890D

0.918

BnaC03g44770D

0.912

BnaC09g47620D

0.912

Your Current Organism:

Brassica napus

NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BnaA02g30460D	BnaA08g27430D	A0A078H7W2	A0A078FRE4	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing.	0.998
BnaA02g30460D	BnaA09g03870D	A0A078H7W2	A0A078G2T5	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.998
BnaA02g30460D	BnaC02g26240D	A0A078H7W2	A0A078H7X0	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.983
BnaA02g30460D	BnaC02g45720D	A0A078H7W2	A0A078IQH4	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	BnaC02g45720D protein.	0.945
BnaA02g30460D	BnaC03g44770D	A0A078H7W2	A0A078FPU5	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	BnaC03g44770D protein.	0.985
BnaA02g30460D	BnaC03g63890D	A0A078H7W2	A0A078GY62	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	Small nuclear ribonucleoprotein-associated protein.	0.982
BnaA02g30460D	BnaC04g22660D	A0A078H7W2	A0A078I4I4	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	BnaC04g22660D protein.	0.998
BnaA02g30460D	BnaC09g37610D	A0A078H7W2	A0A078HEG0	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.983
BnaA02g30460D	BnaC09g41060D	A0A078H7W2	A0A078FV97	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	BnaC09g41060D protein.	0.986
BnaA02g30460D	BnaC09g47620D	A0A078H7W2	A0A078G515	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	BnaC09g47620D protein.	0.985
BnaA08g27430D	BnaA02g30460D	A0A078FRE4	A0A078H7W2	Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.998
BnaA08g27430D	BnaA09g03870D	A0A078FRE4	A0A078G2T5	Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.996
BnaA08g27430D	BnaC02g26240D	A0A078FRE4	A0A078H7X0	Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.980
BnaA08g27430D	BnaC02g45720D	A0A078FRE4	A0A078IQH4	Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing.	BnaC02g45720D protein.	0.954
BnaA08g27430D	BnaC03g44770D	A0A078FRE4	A0A078FPU5	Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing.	BnaC03g44770D protein.	0.984
BnaA08g27430D	BnaC03g63890D	A0A078FRE4	A0A078GY62	Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing.	Small nuclear ribonucleoprotein-associated protein.	0.982
BnaA08g27430D	BnaC04g22660D	A0A078FRE4	A0A078I4I4	Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing.	BnaC04g22660D protein.	0.999
BnaA08g27430D	BnaC09g37610D	A0A078FRE4	A0A078HEG0	Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.980
BnaA08g27430D	BnaC09g41060D	A0A078FRE4	A0A078FV97	Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing.	BnaC09g41060D protein.	0.985
BnaA08g27430D	BnaC09g47620D	A0A078FRE4	A0A078G515	Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing.	BnaC09g47620D protein.	0.984