Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaC09g35960DBnaC09g35960D protein. (303 aa)    
Predicted Functional Partners:
BnaA03g46880D
BnaA03g46880D protein.
      
 0.706
BnaA04g05640D
BnaA04g05640D protein.
      
 0.706
BnaA08g14650D
BnaA08g14650D protein.
      
 0.706
BnaA01g14050D
BnaA01g14050D protein.
      
 0.706
BnaC07g42330D
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
      
 0.706
BnaA01g35110D
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
      
 0.706
BnaC02g22590D
BnaC02g22590D protein.
      
 0.700
BnaA02g16660D
BnaA02g16660D protein.
      
 0.700
BnaA02g16670D
BnaA02g16670D protein.
      
 0.700
BnaCnng49890D
BnaCnng49890D protein.
      
 0.700
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.