STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA07g39130DBnaA07g39130D protein. (117 aa)    
Predicted Functional Partners:
BnaC03g16640D
BnaC03g16640D protein.
  
     0.472
BnaC04g29640D
BnaC04g29640D protein.
  
     0.470
BnaA06g39070D
Floricaula/leafy-like transcription factor; Probable transcription factor. Belongs to the FLO/LFY family.
  
     0.470
BnaCnng24550D
Floricaula/leafy-like transcription factor; Probable transcription factor. Belongs to the FLO/LFY family.
  
     0.464
BnaA05g12220D
BnaA05g12220D protein.
  
     0.463
BnaC01g20590D
BnaC01g20590D protein; Belongs to the tetraspanin (TM4SF) family.
  
     0.463
BnaC06g05070D
BnaC06g05070D protein; Belongs to the tetraspanin (TM4SF) family.
  
     0.461
BnaA03g48970D
BnaA03g48970D protein; Belongs to the tetraspanin (TM4SF) family.
  
     0.460
BnaA09g40370D
BnaA09g40370D protein.
  
     0.458
BnaC02g41660D
BnaC02g41660D protein.
  
     0.457
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.