STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC02g44600DBnaC02g44600D protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1197 aa)    
Predicted Functional Partners:
BnaA07g04200D
BnaA07g04200D protein.
   
  
 0.446
BnaA09g03750D
BnaA09g03750D protein.
    
 0.433
BnaC02g39760D
Mitochondrial Rho GTPase.
    
 0.433
BnaC03g34230D
Mitochondrial Rho GTPase.
    
 0.433
BnaAnng23350D
Mitochondrial Rho GTPase.
    
 0.433
BnaA09g52280D
BnaA09g52280D protein.
    
 0.433
BnaAnng37000D
BnaAnng37000D protein.
  
 
 0.431
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.