STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA07g38130DBnaA07g38130D protein. (187 aa)    
Predicted Functional Partners:
BnaA06g11830D
BnaA06g11830D protein.
    
 0.924
BnaC05g13670D
BnaC05g13670D protein.
    
 0.924
BnaC09g53650D
BnaC09g53650D protein.
    
 0.881
BnaA08g14490D
BnaA08g14490D protein.
    
 0.878
BnaA03g47830D
BnaA03g47830D protein.
    
 0.878
BnaC08g12100D
BnaC08g12100D protein.
    
 0.878
BnaC02g46310D
BnaC02g46310D protein.
    
 
 0.878
BnaA03g13020D
BnaA03g13020D protein.
    
 0.872
BnaA10g12140D
BnaA10g12140D protein.
    
 0.835
BnaC08g12090D
BnaC08g12090D protein.
    
 
 0.817
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.