STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaAnng11050DBnaAnng11050D protein. (353 aa)    
Predicted Functional Partners:
BnaCnng14500D
BnaA02g12180D protein.
      
 0.477
BnaCnng39100D
BnaCnng39100D protein.
  
     0.473
BnaA03g36230D
BnaA03g36230D protein.
  
     0.471
BnaA03g17330D
BnaA03g17330D protein.
      
 0.470
BnaAnng18530D
BnaAnng18530D protein.
      
 0.470
BnaC09g43180D
BnaC09g43180D protein.
      
 0.467
BnaA05g36660D
BnaA05g36660D protein.
  
     0.467
BnaA09g54720D
BnaA09g54720D protein.
  
     0.461
BnaAnng22390D
BnaAnng22390D protein.
  
     0.458
BnaC03g26690D
BnaC03g26690D protein.
      
 0.457
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.