Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaA10g30070DBnaA10g30070D protein. (373 aa)    
Predicted Functional Partners:
BnaC05g35230D
BnaC05g35230D protein.
    
   0.663
BnaA07g00650D
BnaA07g00650D protein.
    
  0.555
BnaA09g42180D
BnaA09g42180D protein.
      
 0.552
BnaA02g35160D
BnaA02g35160D protein.
   
  
 0.535
BnaC04g04770D
BnaC04g04770D protein.
    
 
 0.526
BnaC04g53030D
BnaC04g53030D protein.
      
 0.510
BnaC08g11580D
BnaC08g11580D protein.
  
 
  0.501
BnaA04g05710D
BnaA04g05710D protein.
      
 0.494
BnaC06g09930D
BnaC06g09930D protein.
  
 
  0.492
BnaA01g24490D
BnaA01g24490D protein.
  
     0.486
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.