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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC07g49080DBnaC07g49080D protein; Belongs to the protein kinase superfamily. (442 aa)    
Predicted Functional Partners:
BnaA02g28430D
BnaA02g28430D protein; Belongs to the protein kinase superfamily.
  
  
 
0.902
BnaA06g32540D
BnaA06g32540D protein; Belongs to the protein kinase superfamily.
  
  
 
0.900
BnaA08g24860D
BnaA08g24860D protein; Belongs to the disease resistance NB-LRR family.
    
  0.900
BnaC04g56870D
BnaC04g56870D protein.
  
 
  0.437
BnaCnng65160D
BnaCnng65160D protein.
  
 
  0.429
BnaA08g02570D
BnaA08g02570D protein.
  
 
  0.428
BnaA01g26270D
BnaA01g26270D protein.
  
 
  0.422
BnaC03g40790D
BnaC03g40790D protein.
  
 
  0.422
BnaA05g11580D
BnaA05g11580D protein.
  
 
  0.419
BnaC04g13360D
BnaC04g13360D protein; Belongs to the protein kinase superfamily.
  
 
  0.409
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.