STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaCnng23950DBnaCnng23950D protein. (76 aa)    
Predicted Functional Partners:
BnaC06g42060D
BnaC06g42060D protein.
    
 0.988
BnaC03g60090D
BnaC03g60090D protein.
   
 0.954
BnaA06g37370D
BnaA06g37370D protein.
   
 0.954
BnaC02g02190D
BnaC02g02190D protein.
   
 0.953
BnaA03g01760D
BnaA03g01760D protein.
   
 0.953
BnaA09g12190D
BnaA09g12190D protein.
   
 0.951
BnaCnng39010D
BnaCnng39010D protein.
   
 0.951
BnaAnng30740D
BnaAnng30740D protein.
   
 0.951
BnaA07g08190D
BnaA07g08190D protein.
    
 0.949
BnaC03g58920D
BnaC03g58920D protein.
    
 0.949
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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