STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaCnng26370DCyclin; Belongs to the cyclin family. (210 aa)    
Predicted Functional Partners:
BnaA08g29690D
ATP-dependent DNA helicase 2 subunit KU80; Single-stranded DNA-dependent ATP-dependent helicase.
    
 0.907
BnaC06g27700D
DNA ligase.
   
 0.807
BnaA10g11190D
DNA ligase.
    
 0.796
BnaC09g53370D
DNA ligase.
    
 0.796
BnaA06g11440D
BnaA06g11440D protein.
    
 0.698
BnaC05g13070D
BnaC05g13070D protein.
    
 0.698
BnaA01g24140D
BnaA01g24140D protein.
    
 0.588
BnaCnng41270D
BnaCnng41270D protein.
    
 0.588
BnaCnng53340D
BnaCnng53340D protein.
    
 0.588
BnaC09g40580D
BnaC09g40580D protein.
    
 0.537
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.