STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaAnng12220DBnaAnng12220D protein. (97 aa)    
Predicted Functional Partners:
BnaA07g07530D
BnaA07g07530D protein.
  
     0.490
BnaA09g13810D
BnaA09g13810D protein.
  
     0.467
BnaCnng09980D
BnaCnng09980D protein.
  
     0.464
BnaC06g07920D
BnaC06g07920D protein.
  
     0.457
BnaC02g19200D
BnaC02g19200D protein.
  
     0.457
BnaC09g22160D
BnaC09g22160D protein.
  
     0.448
BnaAnng38970D
BnaAnng38970D protein.
  
     0.447
BnaC06g18080D
BnaC06g18080D protein.
  
     0.445
BnaA06g03050D
BnaA06g03050D protein.
  
     0.444
BnaA04g27200D
BnaA04g27200D protein.
  
     0.444
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.